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• DOC is sometimes used by users of Palm OS as shorthand for PalmDoc, an unrelated format (commonly using PDB filename extension) used to encode text files such as ebooks.
• The number of structure data available at PDB has increased each year, being obtained typically by X-ray crystallography, NMR spectroscopy, or cryo-electron microscopy.
• While the name of the PDB implies exclusivity, it has historically been briefed to other high officials.
• In addition to supporting the policies and initiatives of the State Department, INR contributes to the President's Daily Briefings (PDB) and serves as the federal government's primary source of foreign public opinion research and analysis.
• In addition to ExplorEnz, the enzyme information system of the IUBMB, these include DSMZ databases such as BacDive and CellDive, protein sequence and protein structure databases such as UniProt and PDB, literature databases such as PubMed and Europe PubMed Central and ontologies such as NCBI-MeSH.
• This generally involves selecting protein structures from databases such as Protein Data Bank (PDB), Families of Structurally Similar Proteins database (FSSP), Structural Classification of Proteins database (SCOP), or CATH database, after removing protein structures with high sequence similarities.
• Sequerome directly queries the input sequence against a variety of databases/tools ('popular public domains' and 'privately hosted services') including BLAST, Protein Data Bank (PDB), REBASE and others, and generates outputs that are intuitive and easily comprehensible.
• BALL supports molecular file formats including PDB, MOL2, MOL, HIN, XYZ, KCF, SD, AC, and secondary data sources like DCD, DSN6, GAMESS, JCAMP, SCWRL, and TRR.
• In 1962 he undertook the crystal structure of the Staphylococcal nuclease enzyme, solved to 2Å resolution in 1969, published in 1971, and deposited in the Protein Data Bank (PDB code 1SNS) as one of the first dozen protein crystal structures.
• The first high-resolution 3D solution structure of mammalian (mouse) translocator protein (TSPO) in a complex with its diagnostic PK 11195 ligand was determined by using NMR spectroscopy techniques by scientists from the Max-Planck Institute for Biophysical Chemistry in Goettingen in Germany in March 2014 and has a PDB id: 2MGY.
• This classifies it as a portable application to read PDF, XPS, DjVu, CHM, eBooks (ePub, FictionBook, Mobi PDB and TCR), Comic Book (CBZ, CBR, CBT, and CB7) and image formats (BMP, GIF, JPEG, JPEG 2000, JPEG XR, PNG, TGA, and WebP).
• Johnson's lab at Oxford solved and studied many other protein structures, and she is a depositor on 100 PDB entries including many forms of glycogen phosphorylase and of cell cycle CDK/cyclin complexes As well as carrying out cutting-edge research, she nurtured numerous careers, training a generation of crystallographers in Oxford who themselves now train future leaders across the world.
• WHAT IF also provides an environment for: homology modeling of protein tertiary structures and quaternary structures; validating protein structures, notably those deposited in the PDB; correcting protein structures; visualising macromolecules and their interaction partners (for example, lipids, drugs, ions, and water), and manipulating macromolecules interactively.
• Crystal structures of two bacterial phosphoglucosamine mutases are known (PDB entries 3I3W and 3PDK), from Francisella tularensis and Bacillus anthracis.
• The first structure solved was the active site containing EutB subunit of EAL from Listeria monocytogenes with the PDB accession code.
• The standard established for carbon-13 work was the Pee Dee Belemnite (PDB) and was based on a Cretaceous marine fossil, Belemnitella americana, which was from the Peedee Formation in South Carolina.
• Solanezumab binds the central epitope of monomeric amyloid-β, KLVFFAED, (PDB ID 4XXD) with picomolar affinity.
• Search the database using a superfamily, family, or species name plus a sequence, SCOP, PDB, or HMM ID's.
• STDU Viewer is computer software, a compact viewer for many computer file formats: Portable Document Format (PDF), World Wide Fund for Nature (WWF), DjVu, comic book archive (CBR or CBZ), FB2, ePUB, XML Paper Specification (XPS), Text Compression for Reader (TCR), Mobipocket (MOBI), AZW, multi-page TIFF, text file (TXT), PalmDoc (PDB), Windows Metafile (EMF), Windows Metafile (WMF), bitmap (BMP), Graphics Interchange Format (GIF), JPEG-JPG, Portable Network Graphics (PNG), Photoshop Document (PSD), PiCture eXchange (PCX-DCX).
• In the Directorate of Intelligence (DI), he contributed to National Intelligence Estimates (NIEs): wrote for President’s Daily Brief (PDB) and National Intelligence Daily (NID); and gave well-received briefings to congressmen, policymakers and military commanders.

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